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This volume presents selected papers from a three-day workshop held during the DIMACS special years on Mathematical Support for Molecular Biology. Participants from the world over attended, giving the workshop an important international component.
The study of discrete mathematics and optimization with medical applications is emerging as an important new research area. Significant applications have been found in medical research, for example in radiosurgical treatment planning, virtual endoscopy, and more. This volume presents a substantive cross-section of active research topics ranging from medical imaging to human anatomy modeling, from gamma knife treatment planning to radiation therapy, and from epileptic seizures to DNA screening. This book is an up-to-date resource reflecting current research directions.
Foreword vii
Preface ix
Breast cancer survival and chemotherapy:
A support vector machine analysis
Y.-J. Lee, O. L. Mangasarian, and W. H. Wolberg 1
A model for learning human vascular anatomy
P. Hall 11
Optimization of gamma knife radiosurgery
M. C. Ferris and D. M. Shepard 27
Sphere packing using morphological analysis
Q. J. Wu 45
Transition to epileptic seizures: Optimization
L. D. Iasemidis, D.-S. Shiau, J. C. Sackellares,
and P. Pardalos 55
Analysis of magnetic resonance angiography images using
skeletonization and distance transforms
I. Nystrom and O. Smedby 75
Computing medial surfaces
S. Bouix and K. Siddiqi 91
A mixed variable optimization approach to non-rigid
image registration
A. Rangarajan and H. Chui 105
On computing the nearest neighbor interchange distance
B. DasGupta, X. He, T. Jiang, M. Li, J. Tromp,
and L. Zhang 125
Two-stage group testing for complexes in the presence
of errors
A. J. Macula, D. C. Torney, and P. A. Vilenkin 145
On the perfectness of tagged probe interval graphs
L. Sheng, C. Wang, and P. Zhang 159
Frequent sets in the presence of clones: An example
from medical surveillance
S. E. Brossette and A. P. Sprague 165
A survey on combinatorial group testing algorithms
with applications to DNA Library Screening
H. Q. Ngo and D.-Z. Du 171
Optimization problems in 3D conformal radiation therapy
Q. J. Wu, C. H. Sibata, and J. Wang 183
Medical applications of discrete tomography
A. Kuba, G. T. Herman, S. Matej, and A. Todd-Pokropek 195
A study of 3D imaging approaches in medicine
J. K. Udupa 209
Discrete mathematics in medical imaging: A personal view
P. Hall 217
Index of Volumes